Changing the tire size using AE only changes the tire size parameter in the
ABS module and doesn't do anything to correct shift speeds (which are controlled by the
PCM). As you have found out, the
ABS module change only makes the speedometer accurate (or less accurate depending on how far you go).
There are a couple of ways to change the shift points, but they all involve reprogramming of the calibrations on the chip to accomplish this goal.
Changing the tire size does not change the shift points either by measured speed (from the speedometer) or by
RPM. It simply changes the actual ground speed at which the shift points take place.....which just happens to be a lowered ground speed. With the change in the absolute final drive by changing the tires, the truck effectively shifts at a lower point, making the truck feel sluggish or that it is bogging, when in actuality, the
PCM thinks that it is shifting at the right time based on it's programming.
Since you have the FU, there aren't any changes we can make to your programming because everyone that uses the VRAA6S3 calibration you are using (which number in the hundreds) would have shift points that become too high with their stock-ish tire sizes.