Aaron,
I went back and looked at all the files we did for you and as I suspected, there are not any camshaft adjustments in your files. Even if there were, I'd have serious doubts that it would cause any sort of problem. I've seen tuning with more aggressive camshaft adjustments than anything we do and it just doesn't cause problems. In fact, the Roush stuff used on the supercharged setups is WAY more aggressive than anything we do and they work quite well.
I'd say that if the camshaft phasers are bad that it is most likely related to a lubrication problem. It's possible something related to the filter could be the cause, but I think even that's highly unlikely. I can't recall ever seeing a bad oil filter in 15 years of automotive service... even the cheap crap that some of the 10 minute oil change places use. I would say that it is more likely that there might have been some rubbish on the "wrong" side of the filter which got pushed into the oil gallery and eventually up into the heads.
Of course, this is all speculation. I guess the dealer will know more when they pull the camshafts out and check to see what's actually restricting oil flow to the cam phasers.
Hope it all works out well.
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