I'll have to check the documentation, but as a general rule you should NOT use the custom options the first time you program the vehicle. The reason is that there is no calibration data stored in the unit at this time and the custom options routines do not have anything to go off of and the data is (for lack of a better term) corrupt. After the very first programming session, you can then use the custom options with no problem. This appears to be what happened to you and you should not have this problem any further.
This is obviously a bug in the firmware and we'll get it fixed.
Outside of that, if you purchased your programmer after 12/03/2008 then there are no updates at this time.
Take care.
__________________
Bill Cohron - The Mad Doctor  
Power Hungry Performance - The ORIGINAL in Ford performance tuning... Since 1997!
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